PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10019273
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 201aa    MW: 23121.4 Da    PI: 10.5396
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10019273genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.21.2e-1083127549
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                  ++ rr+ +NRe+ArrsR RK++ +e+L+++   L  eN++L +++
  Lus10019273  83 RKRRRMVSNRESARRSRMRKQKHLENLRNRLNRLRVENRELTDRV 127
                  6789***********************************998775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.1E-1079143IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.2281144IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.66E-1083131No hitNo description
Gene3DG3DSA:1.20.5.1705.9E-883156No hitNo description
PfamPF001701.1E-783127IPR004827Basic-leucine zipper domain
CDDcd147022.91E-1384131No hitNo description
PROSITE patternPS00036086101IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MFENSAFLNF DYDLFPSLDR DDHFYSPHAM LIFSSNDDDV IIPLAKFAEK PDMISLTVDQ  60
TTKSCGSNAA TTMGAEQSVI EERKRRRMVS NRESARRSRM RKQKHLENLR NRLNRLRVEN  120
RELTDRVRFV SYHLNRVRTD TNRLRSEYIM LRRKLSNVGH ILLLRQLSSA TSTGWPCNNM  180
IFPAVPSGAA AEKLPSLITS *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18286RKRRR
282103RKRRRMVSNRESARRSRMRKQK
395102RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011007850.11e-48PREDICTED: basic leucine zipper 43-like
RefseqXP_011041724.18e-49PREDICTED: basic leucine zipper 43-like
TrEMBLA0A067KIL32e-47A0A067KIL3_JATCU; Uncharacterized protein
STRINGPOPTR_0007s14740.13e-41(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.22e-15basic leucine-zipper 6